hsd_id_Theobroma_cacao_2976 [Download]

Identity: XP_017970492.1

Length:
2380
PF Identity:
PF03732, PF00078, PF13456, PF17919
PF Description:
Retrotransposon gag protein, Reverse transcriptase (RNA-dependent DNA polymerase), Reverse transcriptase-like, RNase H-like domain found in reverse transcriptase
IPR Identity:
IPR005162, IPR000477, IPR002156, IPR041577
IPR Description:
Retrotransposon gag domain, Reverse transcriptase domain, Ribonuclease H domain, Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain

Identity: XP_017976528.1

Length:
2370
PF Identity:
PF17921, PF17919, PF00078, PF03732, PF13456, PF00665
PF Description:
Integrase zinc binding domain, RNase H-like domain found in reverse transcriptase, Reverse transcriptase (RNA-dependent DNA polymerase), Retrotransposon gag protein, Reverse transcriptase-like, Integrase core domain
IPR Identity:
IPR041588, IPR041577, IPR000477, IPR005162, IPR002156, IPR001584
IPR Description:
Integrase zinc-binding domain, Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain, Reverse transcriptase domain, Retrotransposon gag domain, Ribonuclease H domain, Integrase, catalytic core
Select a gene from list:

>XP_017970492.1
MGITSAEVDQNLRKKGDNECIPWSFLRSYIMKQRDTEQGQLVMALGIYGLVIFPKVLGHIEVGIIDFFEQVVNKANPSPSILAETLRSLNYCRRKGEGRFVGCAQLLSIWIVSHFECKVDKFRKPFHPQTAPIREFCESEWPENRTKEQWISRLRELMSVEVTWRAPWMPHHPVLYKCGNEPWVPLMGPWGAISYAPIMVRRQFGSEQFVPMTHRLNTLEFAYGEPGFLKRIEEIAQAWKKTSRVDQGRYTDEVTTGYQIWHDQRVKDVVYPKEDALRGPVDPEPRDALLESELARKKSEAENASWKQRYEDLQKECEKMKREVSEQRKKVRKMEGKYESLNDKFFATTSELQREIQVRENRDNELQTHNDGLRRQVRFQQESIQLLRQEYEELEGVMTTYQQEYERLKQQSTRIQEWGESYRQAYTEKYNQMDYLVWQMREVAYKEEMREQLAKMMELMMSLSKGKRAIEEPAPSENPPAQDSGNQREDPPYPPGFTPPHAQTSQRVHPQVIPPVYYNAPPPLGHQPIHGQFGPYSRINPAEPINVPDLDDPKEQEKLRKDSSQTGENEKDQKKYDLLEERLRAIEGVDRFGTMDATELCLVPDVLIPAKFKVPKFEKYDGTKCPMAHITMYCRKMAAQSHDDKLLIHFFQDSLTRSAAQWYVQLDRNRIKTWKDLARAFIAQYKHVAELAPDRLSLQTMEKKQSENFKEYAQRWRDTAAQVQPPLTDKEMTVLFINTLRAPFYERLIGNATKNFADLVLSGEIIEGAIKSGKIEGHEVASSKKGSTPKKKEGDVQAVAHDSQQAHNFNPYYPYPPYQPFYPHIGNVTQNPYVYQPVPQPTFQTNVLPQTPPPRPIASTNNPGHGQRGPKTTPERPKFDPIPVPYTTLLPQLIENRLLARTPLEPLRPPFPKWYDPNAHCDYHFGIQGHSTENCTVLKHKVQALIKAGLLNFAKKDSSGVDGNPLPNHGRPTVNAIHEGMIRRVKKGIDEIQTLMDKVFEALSKINAITPEPIDTKELGHDFAYSCKFHMGAIGHSIQNCDGFRRKLQELMDSSVIEFYEGAEENLVGTINGDTPAEVASSSFGANKPKPLTIFYEENKSPMNDTSPTMIRNGITIEVPSPFPYKSDKAVPWNYECNILGTASSAPQASFEDLTGVGGITRSGRCYSPEVAENVGKGKPAQGEGGLKKADTFSKDQVDESVVAPNNEVKNPVTEKEAGEFLKFIKHSEYSVVEQLTKMPARISLLSLLLNSEAHRNALLKVLNQAYVAQDISVEKLDHIVGNITVGNFIAFNDEEIPSGGRGSNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLPVDVSYMRTSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAGAIPSSLHQKVKFIAEGQLISVCAEEDILAIQPSSAPYVEATEEVPECSFRSFEFVNATYVGERKVIPTPRLSVATKMGVKQTVGKGCRAGLGLGKNLQGINRPLTPMKNEERFGLGYKPTKEERRKLTAQKKIKRMAQLEGKEEEFGERTIPHLYETFRSAGFIHPEAPPKVNQVLRIFDELSIHMIRDEEPDEKIPVVYPVLPGEELSNWTATELPIIFKSSKMSLNNEYEDNLDNDLNIDFEMFPNVDELKNEEEVDDYGLPPDLSRMLEQEENEILPHQELTEMINLGNGEEKKEVKIGTSLPSDERQKLEELLREYVDVFAWSYQDMPGLNTDIVVHKLPMGPDCKPIKQKLRRMKPEMLLKIKEEVKKQFDAGFLEVAKYPEWVANIVPVPKKDGKVRMCDDYRDLNRASPKDSFPLPHIDTIVDNTAKHALFSFMDGFSGYNQIKMAPEDMEKTTFVTMWGTFCYKVMPFGLKNAGATYQRAMVALFHDMMHKEIEVYVDDMIAKSHTERDHTVNLKKLFERLRKFQLKLNPAKCTFGVTSGKLLGFIVSEKGIEVDPDKIRAIQELPPPKTQKEVRGFLGRLNYIARFISQLTCKCDPIFKLLRKRDPGEWNEECQIAFDKIKEYLTNPPVLMPPTVGKPLILYLTVNKNSMGCVLGQHDETGKKERAVYYLSKKFMEYESKYSTLEKMCCALAWTAXRLRQYMLYHTTWLVAKLDPIKYIFEKHCLSGRIARWQVLLSEYDIVYVSQKSIKGSAIADFLANRANEDYESVSFDFPDEDLMAVLHVEEVGPNELNPWKVYFDGASNALGHGIGXVLISPNEKYYPATARLNFNCTNNMAEYEALVMGLQAAIEMKADAIDVYGDSALVICQMKGEWETRDPKLVPYKKLVTELSKQFKKISFNHLPREENQIADALATLAAMFKIKEAADVRLFDLEVHEVSAHCLNVEEEVDGKPWYHDIMQYIKH

>XP_017976528.1
MEEEQRERMDRMERAQEEMREQLAKMMELMMSLSKGKRAIEEPAPSENPPAQDSGNQREDPPYPPGFTPPHAQTSQRVHPQVIPPVYYNAPPPLGHQPIHGQFGPYSGINPAEPINVPDLDDPKEQEKLRKDSSQTGENEKDQKKYDLLEERLRAIEGVDRFGTMDATELCLVPDVLIPAKFKVPKFEKYDGTKCPMAHITMYCRKMAAQSHDDKLLIHFFQDSLTGSAARWYVQLDRNRIKTWKDLARAFIAQYKHVAELAPDRLSLQTMEKKQSENFKEYAQRWRDTAAQVQPPLTDKEMTVLFINTLRAPFYERLIGNATKNFADLVLSGEIIEGAIKSGKIEGHEVASSKKGSTPKKKEGDVQAVAHDSQQAHNFNPYYPYPPYQPFYPHIGNITQNPYVYQPVPQPTFQTNVLPQTPPPRPIASTNNPGHGQRGPKTTPERPKFDPIPVPYTTLLPQLIENRLLARTPLEPLRPPFPKWYDPNAHCDYHFGIQGHSTENCTALKHKVQALIKAGLLNFAKKDSSSVDGNPLPNHGRPTVNAIHEGMIRRVKKGIDEIQTPMDKVFEALSKINAITPEPIDTKELGHDLAYSCKFHMGAIGHSIQNCDGFRRKLQELMDSSVIEFYEEAEENLVGTINGDTPAEVASSSFGANKPKPLTIFYEENRSPMNDTSPTMIRNGITIEVPSPFPYKSDKAVPWNYECNILGTASSAPQASFEDLTGVGGITRSGRCYSPEVAERVEKGKPAQGEGGLKKADTFSKDQVDESVVAPNNEVKNPVTEKEAGEFLKFIKHSEYSVVEQLTKMPARISLLSLLLNSEAHRNALLKVLNQAYVAQDISVEKLDHIVGNITVGNFIAFNDEEIPSGGRGSNKALHITIKCKDHAVPRVLVDNGSALNVMPRSTLTKLPVDVSYMRTSRMVVRAFDGTTREVVGDIELPIKIGPCIFEVQFQVMDIAPSYNCLLGRPWIHMAGAIPSSLHQKVKFIAEGQLISVCAEEDILAIQPSSAPYVEATEEVPECSFRSFEFVNATYVGERKVIPTPRLSVATKMGVKQTVGKGCRAGLGLGKNLQGINRPLTPMKNEERFGLGYKPTKEERRKLTAQKKIKRMAQLEGKEEEFGERTIPHLYETFRSAGFIHPEAPPKVNQVLRIFDELSIHMIRDEEPDGKIPVVYPVLPGEELSNWTATELPIIFKSSKMPINTCPYTRPTLPVCRSLNNEHEDNLDNDLNIDFEIIPNIDELKNEEEVDDYSLPPDLSRMLEQEEKEILPHQELTEMINLGNGEEKKEVKIGTSLSSDERQKLEELLREYVDVFAWSYQDMPGLNTDMVVHKLPLEPDCKPIKQKLRRMKPEMLLKIKEEVKRQFDAGFLEVAKYPEWVANIVPVPKKDGKVRMCVDYRDLNRASPKDSFPLPHIDTLVDNTAKHALFSFMDGFSGYNQIKMAPEDMEKTTFVTMWGTFCYKVMPFGLKNAGATYQRAMVALFHDMMHKEIEVYVDDMIAKSHTERDHTVNLKKLFERLRKFQLKLNPAKCTFGVTSGKLLGFIVSEKGIEVDPDKIRAIQELPPPKTQKEVRGFLGRLNYIARFISQLTCKCDPIFKLLRKRDPGEWNEECQIAFDKIKEYLTNPPVLMPPTVGKPLILYLTVNKNSMGCVLGQHDETGKKERAVYYLSKKFMEYESKYSALEKMCCALAWTAQRLRQYMLYHTTWLVAKLDPIKYIFEKPCLSGRIARWQVLLSEYDIVYVSQKSIKGSAIADFLADRANEDYESVSFDFPDEDLMVVLHIEEVGPNELNPWKVYFDGASNALGHGIGAVLISPNGKYYPATARLNFNCTNNMAEYEALVMGLQAAIDMKADAIDVYGDSALVICQMKGEWETRDPKLVPYKKLVTELSKQFKEISFNHLPREENQIADALATLAAMFKIKEAADVRPFDLEVREVSAHCLNVEEEVDGKPWYHDIMQYIKHQAYPENVTDNDKRTLRRLAMGFFLSGEVLYKRSRDQVLLRCVDVAEANKIMKEVHEGTCGAHANGHMLARQIMRAGYYWLTLESDCINFARKCHKCQVYADRIHAPPAPLHVFTAPWPFSMWGMDVIGLITPKASNGHRFILVAIDYFTKWVEAAFYANVTQKVVCRFIQKEIICRYGLPKRIIMDNASNLNGAMVKDVCAKFKIKHHNSTTYRLKMNGAVEAANKNIKKIVEKMTEVYKDWHEKLSFALHAYRTSVRTSTGVTPYSLVYGAEAVLPVEVEIPSLRVLMETELKDAEWVRSRYEQLNLIKERRLAALCHGXMYQRRMMXAYEKKVHPRQFREGELVLKRILPNQTHFRGKWMPNWEGPYVVKKAFSGGDLILADMDGGDLPNPINADTVKKYYA

Expression