hsd_id_Zea_mays_5827 [Download]

Identity: XP_020406736.1

Length:
949
PF Identity:
PF03732, PF00098, PF00665, PF17919, PF17921
PF Description:
Retrotransposon gag protein, Zinc knuckle, Integrase core domain, RNase H-like domain found in reverse transcriptase, Integrase zinc binding domain
IPR Identity:
IPR005162, IPR001878, IPR001584, IPR041577, IPR041588
IPR Description:
Retrotransposon gag domain, Zinc finger, CCHC-type, Integrase, catalytic core, Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain, Integrase zinc-binding domain

Identity: XP_035816895.1

Length:
949
PF Identity:
PF17919, PF00098, PF00665, PF03732, PF17921
PF Description:
RNase H-like domain found in reverse transcriptase, Zinc knuckle, Integrase core domain, Retrotransposon gag protein, Integrase zinc binding domain
IPR Identity:
IPR041577, IPR001878, IPR001584, IPR005162, IPR041588
IPR Description:
Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain, Zinc finger, CCHC-type, Integrase, catalytic core, Retrotransposon gag domain, Integrase zinc-binding domain

Identity: XP_035817131.1

Length:
1049
PF Identity:
PF00665, PF03732, PF00098, PF17921, PF17919
PF Description:
Integrase core domain, Retrotransposon gag protein, Zinc knuckle, Integrase zinc binding domain, RNase H-like domain found in reverse transcriptase
IPR Identity:
IPR001584, IPR005162, IPR001878, IPR041588, IPR041577
IPR Description:
Integrase, catalytic core, Retrotransposon gag domain, Zinc finger, CCHC-type, Integrase zinc-binding domain, Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain

Identity: XP_035822462.1

Length:
1110
PF Identity:
PF00098, PF03732, PF17919, PF17921, PF00665
PF Description:
Zinc knuckle, Retrotransposon gag protein, RNase H-like domain found in reverse transcriptase, Integrase zinc binding domain, Integrase core domain
IPR Identity:
IPR001878, IPR005162, IPR041577, IPR041588, IPR001584
IPR Description:
Zinc finger, CCHC-type, Retrotransposon gag domain, Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain, Integrase zinc-binding domain, Integrase, catalytic core
Select a gene from list:

>XP_020406736.1
EEKKLAMASLEFEGYALIWWEQLLRDREDDGEDPIITWQEMKREMRIRFVPKHYRRDLFDKLQNLRQGSFSVEEYYKEMEKAMIRANVYEDEEQTIARFMAGLHRNIQRIVEFQPYQSLIDLVHQATKAERQLQQDAKNSKPLSYGARTMTGGSKSISSYKPAASTSTSVGSTAKSSGIQCFKCGGRGHVIKECPNNRVILVTDDGEYTSASEEEAEAGNEDDIDKSEEHTGCEFEHGTTLVVTQILSVQMKEAEIGQRHNLFQTRAKVQDKVVKVIIDGGSCHNLASREMVDKLGLKLQRHPHPYHVQWLNESGDIKIGYKVKVPFKIGEYVDTVECDVAPMSVCHMLLGRPWQYDRQDFEDVFPQETPAGLPPIRGIEHQIDLIPGAALPNRPPYRTNPEETKEIQRQVQELLDKGFVRESLSPCAVPVILVPKKDGSWRMCVDSKGIEVDESKVKAIKDWPAPTNVSQVRSFHGLAGFYRRFVRDFSTIASPLNELTKKGVEFKWGNSQEDAFQELKKHLTEAPVLILPDFTKTFEVECDASGIGIGGVLMQQGKPIAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYIVKYKKGKDNVVADALSRRNDGFLFRANKLCVPNSSVRLLLLQESHGGGLTGHFGQRKTYEMLSDHFYWPKMRRDVIRFVERCVTCHKAKSKLNPHGLYTPLPAPKIPWEDISMDFVLGLPMTRKKRDSIFVVVDRFSKMAHFIPCNKSDDASHVANLFFREIVRLHGVPKTIVSDRDVKFVSYFWKTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSMLLRTMVKKNLKDWEECLPHVEFAYNRAVHSTTNLCPFEIVYGFKPIAPIDLLPLPLVWIHLRKARFPDQRKSKLMPRGDGPFRVLSKINDNAYKI

>XP_035816895.1
EEKKLAMASLEFEGYALIWWEQLLRDREEDGEDPIITWQEMKREMRIRFVPKHYRRDLFDKLQNLRQGSFFVEDYYKEMEKAMIRANVYQDEEQTIARFMAGLHRNIQRIVEFQPYQSLIDLVHQATKAELQLQQDAKSSKPLSYGARTMIGGSKSISSYKPAASTSTSVGSTAKSSGIQCFKCGGHGHVIKECPNNRVILVTDDGEYTSASEEEAEAGNEDDIDKSEEHTGCEFEHGTTLVVTQILSVQMKEAEIGQRHNLFQTRAKVQDKVVKVIIDGGSCHNLASREMVEKLGLKLQRHPHPYHVQWLNESGDIKIGYKVKVPFKIGEYVDIVECDVAPMSVFHMLLGRPWQYDRQDYEDVFPQETPAGLPPIRGIEHQIDLIPGAALPNRPPYRTNPEETKEIQRQVQELLDKGFVRESLSPCAIPVILVPKKDGSWRMCVDSKGIEVDESKVKAIKDWPAPTNVSQVRSFHGLAGFYRRFVRDFSTIASPLNELTKKGVEFKWGNSQEDAFQELKKRLTEAPVLILPDFTKTFEVECDASGIGIGGVLMQQGKPIAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYIVKYKKGKDNVVADALSRRNDGFLFRANKLCVPNSSVRLLLLQESHGGGLTGHFGQRKTYEMLSDHFYWPKMRRDVISFVERCVTCHKAKSKLNPHGLYTPLPAPKIPWEDISMDFVLGLPMTRKKRDSIFVVVDRFSKMAHFIPCNKSDDASHVANLFFREIVRLHGVPKTIVSDRDVKFVSYFWKTLWAKLGTKLLFSTTCHPQTDGQIEVVNRTLSMLLRTMVKKNLKDWEECLPHVEFAYNRAVHSTTNLCPFEIVYGFKPIAPIDLLPLPLVWIHLRKERFPDQRKSKLMPRGDGPFRVLVKINDNAYKI

>XP_035817131.1
EEKKLAMASLEFEGYALIWWEQLLRDREEDGEDPIITWQEMKREMRIRFMPKHYWRDLFDKLQNLRQGSFSVEEYYKEMEKAMIRANVYEDEEQTIACFMAGLHRNIQRIVEFQPYQSLIDLVHQATKAECQLQQDAKSSKPLSYGARTMTGGSKSISRFTATSSATKVGSSTKSSGIQCFKCGGRGHVIKECPNNRVILVTDDGEYTSASEDEAEVGNEDDIDKSEEHTGCEFEHGTTLVVTQILSVQMKEAESGQRHNLFQTRAKVQDKVVKVIIDGGSCHNLASREMVEKLGFKLQRHPHPYHVQWLSESGDIKIGYKVKVPFKIGEYVDTVECDVAPMPVCHMLLGRPWQYDRQDFEDVFPQEXPAGLPPIXGIEHQIDLIPGAALPNRPPYRTNPEETKEIQRQVQELLDKGFVRESLSPCAVPVILVPKKDGSWRMCVDSKGIEVDESKVKAIKDWPAPTNVSQVRSFHGLAGFYRRFVRDFSTIASPLNELTKKGVEFKWGNSQEDAFQELKKRLTEAPVLILPDFTKTFEVECDASGIGIGGVLMQQGKRIAYFSEKLGGAQLNYSMYDKELYALVRALETWHHYLWPKEFVIHSDHEALKYLKGQAKLNCRHAKWVEFIETFPYIVKYKKGKDNVVADALSRRNDGFLFRANKLCVPNSSVRLLLLQESHGGGLIGHFGQKKTYEMLSDHFYWPKIRRDIIRFVERCVTCQLAKSKLNPYGLYTPLPAPKIPWEDISMDFVLGLPMTRKKRDSIFVVVDRFSKMAHFIPCNKSDDASHVANLFFREIMRLHGVPKTIVSDRDVKFVSYFWKTLWAKLGTKLLFSTTCHPPTDGQTEVVNRTLSMVKKILKDWEECLPHVEFAYNRAVHSTTNLCPFEIVYGFKPIAPIDLLPLPLVWIHLRKERFPDQRKSKLMPRGDGPFRVLAKINDNAYKIEIHVPIDDNKVSEQVVSGNVCEKDSVMDVPIFDKTPKSNAPITDKRAVSEVTPPINTEGQNTVKHYTPTSGAPQFDRTPLTELLNLPMYHVKNVLANYLSSFVQDN

>XP_035822462.1
EEKKLAMASLEFEGYALIWWEQLLRDREEDGEDPIITWQEMKREMRIRFVPKHYRRDLFDKLQNLRQGSFSVEEYYKEMEKAMIRANVYEDEEQTIARFMAGLHRNIQRIVEFQPYQSLIDLVHQATKAERQLQQDAKSSKPLSYGARTMTGGSKSISSYKPAASTSTSVGSTAKSSGIQCFKCGGRGHVIKECPNNRVILVTDDGEYTSASEEEAEAGNEDDIDKSEEHTGCEFEHGTTLVVTQILSVQMKEAEIGQRHNLFQTRAKVQDKVVKVIIDGGSCHNLASREMVEKLGLKLQRHPHPYHVQWLNESGDIKIGYKVKVPFKIGEYVDIVCDVAPMSVCHMLLGRPWQYDRQDYEDVFPQETPAGLPPIRGIEHQIDLIPGAALPNRPPYRTNPEETKEIQRQVQELLDKGFVRESLSHCAVPVILVPKKDGSWRMCVDSKGIEVDESKVKAIKDWPAPTNVSQVRSFHGLAGFYRRFVRDFSTIASPLNELTKKGVEFKWGNSQEDAFQELKKRLTEAPVLILPDFTKTFEVECDASGIGIGGVLMQQGKPIAYFSEKLGGAQLNYSVYDKELYALVRALETWQHYLWPKEFVIHSDHEALKYLKGQAKLNRRHAKWVEFIETFPYIVKYKKGKDNVVADALSRRNDGFLFRANKLCVPNSSVRLLLLQESHGGGLTGHFGQRKTYEMLSDHFYWPKMRRDVIRFVERCVTCHKAKSKLNPHGLYTPLPAPKIPWEDISMDFVLGLPMTRKKRDSIFVVVDRFSKMAHFIPCNKSDDASHVANLFFREIVRLHGVPKTIVSDRDVKFVSYFWKTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSMLLRTMVKKNLKDWEECLPHVEFAYNRAVHSTTNLCPFEIVYGFKPIAPIDLLPLPLVWIHLRKERFPDQRKSKLMPRGDGPFRVLAKINDNAYKITGSKLTEYTQRQPLGEDVSELRHGRDAENANITGNDTLADEVNTTVKRLTSDDHLIADGFLHHRRTHHRFISICHRSLYRCCRRAVAPSLPLCYPPAAVNSHHPSPWPGHPARAAAPASTTAVEPLPTVGGHHRRPGTYPDAGGPDSSPAPPTPTTVPPSSR

Expression